Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRILNNKWSIRIIALLLAAILFTSVNANNNNATTFSTTSSSDSEVIENVPVKVYYDKTNLYISGIPETVTVTLSGPRSIVQSAKAQQDFTVYADLKNASIGTQEVKLQVKDVSDRLKVKVNPATVNVNVQEKVTKKFSVDVELSKSVVADGYQAGTPIIDPKKVSITGAKDTIEQIAYVKATLESDGKHKSEFTDKATVSVFDSNLNKLDVEVNPQEVEVTVPVEKVGKSVPVKIKQEGTPESDIEISSMTPDKSEVVVVGDDAVLEKIKEIEIPIDVSKIKADTVKEVTVPVPTGAKSVQPTTIEVKIKTVKKSEANNNPTTSDSNNQDTDTTDNNTDDSGDNNTKISKSFSNMQVYMSGLKNTFDAQMITPANGKVSVTITGEKKTVDGIA--AKDLSVIANLSKSKAGSYSIPLELNGLPDNVA-YVINPRQADFIITDKEASIEVPSKST |
| 2KQ1 Chain:A ((3-100)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TFDHGNLSLGELELTVLYDEERYDIVEQ-T--ETVQVDLEGPRGVLTVFRFARPSYEVFVDLTEAGEGSHTVDVEHRG-FPGDLAVTVEPRMARVQLEERQT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32759 for 590 contacts (-55.5/contact) +
2D Compatibility (PS) -10117 + (NN) -2814 + (LL) 21616
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -28774.0 ( -48.77 by residue)
QMean score : 0.429
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