Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDL--PLVGIPSSSKKLPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTL-EADLKSGFEGADLEADFLDF-TSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAK----KKKPTVLILMGV-PGSYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQSANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNAPEALKEMEKMLYDN |
| 2R79 Chain:A ((1-266)) | --------------------------------LPQRWVSAGGSLSEWVVALGGESKLVGVDTTS-QHPQALKQLPSVGYQRQLAAEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVPQRAEAAELDYRQRLRRQADWIAAAQKSQPAPGVLLVIGNAGGQLLVAGRNTGGDWVLNRAGARNLATH--EGYKPISVEALAALDPVAVVIADRSLEGD--AARAALLKQNPGLAPTRAARDGRLLVLDPTLLVGGLGPRLPDGLAALSAAFYPS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118453 for 2114 contacts (-56.0/contact) +
2D Compatibility (PS) -27668 + (NN) -17840 + (LL) 3700
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -173111.0 ( -81.89 by residue)
QMean score : 0.579
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