Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKVGLLVMAYGTPYKDEDIERYYTDIRHGHKPSEEMIADLRGRYHAIGGLSPLAKITEAQAYGLEKALND-SQDEVEFKAYIGLKHIEPFIEDAVEAMHKDGIEEAISIVLAPHYSSFSVEA--------YNKRAKEAADKLGGPRINAINDWYKQPKFIQMWADRINETAKQIPADELLDTVLIVSAHSLPEKIKQHNDPYPNQLQETADFIFEKVVVPH-YALGWQSEGKTGE-PWLGPDVQDLTRELYGREKYKHFIYTPVGFVAEHLEVLYDNDYE-CKVVTDEVGA-AYHRPPMPNSDPEFLEVLRTVVWEKYSN |
| 4KMM Chain:B ((69-332)) | --------------------------------------------QYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKW-----STIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQS--KVGPMPWLGPQTDESIKGLCERGR-KNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74660 for 1904 contacts (-39.2/contact) +
2D Compatibility (PS) -26851 + (NN) -10950 + (LL) 2872
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -130239.0 ( -68.40 by residue)
QMean score : 0.506
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