Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHLIPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD
1Y23 Chain:D ((5-142))
-ENCIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFHYHMHIIPRYGKGDGFGAVWKTHADDYKPEDLQNISSSIAKRL-
General information:
TITO was launched using:
RESULT:
Template:
1Y23.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62522 for 876 contacts (-71.4/contact) +
2D Compatibility (PS) -14925 + (NN) -6098 + (LL) 132
1D Compatibility (HY) -14000 + (ID) 3950
Total energy: -101363.0 ( -115.71 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1Y23.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y23-query.scw
PDB file :
Tito_Scwrl_1Y23.pdb
: