Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNANGNLKKCPITISSYTLGTE--VSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQ---WGTAEDR-TAEQQKKEQTTFHMARLFGVKHINCGLLE------------KIPEEQIIVALGELCDRA---EELIIGLEFMPY---SGVADLQAAWRVAEACGRDNAQLICDTWHWARANQTAES-IKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVA-----------------TGLEYAALKVYNATKKVLDEAWPEISPR |
| 3VNI Chain:A ((2-290)) | ----------MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLPFY--SDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACG-VDFCLEVLNRFENYLINTAQEGVDFVKQVDHNNVKVMLDTFHMNIEEDSIGGAIRT-AGSYLGHLHTGECN--------------RKVPGRGRIPWVEIGEALADI-GYNGSVVMEPFVRMGGTVGSNIKVWRDISNGADEKMLDREAQAALDFSRYVLEC-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VNI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128943 for 2034 contacts (-63.4/contact) +
2D Compatibility (PS) -27203 + (NN) -13251 + (LL) 2016
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -176281.0 ( -86.67 by residue)
QMean score : 0.475
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