Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIANQTDKLSSPKKLAETR--TKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG
3BY6 Chain:B ((11-120))
----------PVYLQLVDRIKNEVATDVLSANDQLPSVRETALQEKINPNTVAKAYKELEAQKVIRTIPGKGTFITGNT---ASVKNSNQNRLLADLSQVIAELIKSGVKGERIKKIVN----DILG------
General information:
TITO was launched using:
RESULT:
Template:
3BY6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35136 for 687 contacts (-51.1/contact) +
2D Compatibility (PS) -11336 + (NN) -203 + (LL) 1420
1D Compatibility (HY) -7200 + (ID) 2450
Total energy: -54905.0 ( -79.92 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_3BY6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BY6-query.scw
PDB file :
Tito_Scwrl_3BY6.pdb
: