Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFILEVGSLADWVSGLATVGALFWAIKLNSNEN---RKRLTILFRHSFVSKKNGIIISDGKPKVFIITPVNNSKFSL-----EINFRQILLVPSLMDRLLFRAEPKKLSNIEALLKQLENKANWQIIKPNLSGEPIMFDYEFIVKQIKKYADGKRFNFAIEIQFIDSTSKIFKHKEKLELRKIKGL
4IVV Chain:A ((1-174))
ASMEINVSKLRTDLPQVGVQPYRQVHAHSTGNPHSTVQNEADYHWRKDPELGFFSHIVGNG--AIMQVGPVDNGAWDVGGGWNAETYAAVELIESHSTKEEFMTDYRLYI---ELLRNLADEAGLPKTLDTGSLAGIKT-HEYATNNQPNNHSDHVDPYPYLAKWGIS-------REQFKHDIENGL
General information:
TITO was launched using:
RESULT:
Template:
4IVV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49963 for 1340 contacts (-37.3/contact) +
2D Compatibility (PS) -18077 + (NN) -10498 + (LL) 608
1D Compatibility (HY) 400 + (ID) 1200
Total energy: -78730.0 ( -58.75 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_4IVV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IVV-query.scw
PDB file :
Tito_Scwrl_4IVV.pdb
: