Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVVTNIVKIIREKKGITQNELAHSLDVSRQTIHAIEKGKYNPSLELSLKIAKFFDLPVEEIFNLEGE
2XIU Chain:B ((1-65))
-MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNCPLEDIFQWQP-
General information:
TITO was launched using:
RESULT:
Template:
2XIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33027 for 419 contacts (-78.8/contact) +
2D Compatibility (PS) -7087 + (NN) -3996 + (LL) 296
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -54464.0 ( -129.99 by residue)
QMean score : 0.951
(partial model without unconserved sides chains):
PDB file :
Tito_2XIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XIU-query.scw
PDB file :
Tito_Scwrl_2XIU.pdb
: