Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKDVGIDLGTANVLIHVKGRGIVVNEPAVVAINNKTGQ--VLAVGTEARDMVGRTPGDITAIKPMKDGVIADFDIVQEMLRFFIQKLNLKTFFSRPRILICCPTNITSVEQKAIREVAEKSGGKQVFLEEEPKVAAIGAGMEIFEPSGNMIIDIGGGTADVAVLSMGDIVTSQSVKVAGNKWDADILNYVKRKYNLLIGERTAENIKVTIGTACQGAKEE--KMEIRGRDLVSGLPKTISITSSEVEEAIHDSLHLMVLAAKQVLEQTPPELSADIIDRGIIMTGGGSLLHGLDELMSEQLKVPVLITENPLDVVALGTGILLDSLTNKKRNRF |
4CZM Chain:B ((2-326)) | ISNDIAIDLGTANTLIYQKGKGIVLNEPSVVALRNVGGRKVVHAVGIEAKQMLGRTPGHMEAIRPMRDGVIADFEVAEEMIKYFIRKVHNRKGSGNPKVIVCVPSGATAVERRAINDSCLNAGARRVGLIDEPMAAAIGAGLPIHEPTGSMVVDIGGGTTEVAVLSLSGIVYSRSVRVGGDKMDEAIISYMRRHHNLLIGETTAERIKKEIGTARAPADGEGLSIDVKGRDLMQGVPREVRISEKQAADALAEPVGQIVEAVKVALEATPPELADDIADKGIMLTGGGALLRGLDAEIRDHTGLPVTVADDPLSCVALGCGKVLE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186072 for 2753 contacts (-67.6/contact) +
2D Compatibility (PS) -35352 + (NN) -18434 + (LL) 500
1D Compatibility (HY) -27600 + (ID) 7850
Total energy: -274808.0 ( -99.82 by residue)
QMean score : 0.575
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