Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPD-----D-N---GDG--------------L-A--FNKLP------------SNTPQLDYFIDK----------KTKIS----TDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSE-SIEKTHWFLEKSSPEKKEIKLISK |
| 3DQZ Chain:A ((3-256)) | --------------------------------------RKHHFVLVHNAYHGAWIWYKLKPLLESA-GHR--VTAVELAASGIDPRPI----------------QAVETVDEYSKPLIETLKSLP---ENEEVILVGFSFGGINIALAADIFPA-----KIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMS------SEDKAIPCDFIRWMIDNFNV-S---KVYEI--DGGDHMVMLSKPQKLFDSLSAIATD------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34741 for 1590 contacts (-21.8/contact) +
2D Compatibility (PS) -21470 + (NN) -10452 + (LL) 5492
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -66171.0 ( -41.62 by residue)
QMean score : 0.345
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