Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------VITKIDKNKVRKKRHARVRSKISGTESRPRLNVFRSNKNIYAQIID-----DVNGVTLASASNLDKDFGSAESKVDAASKVGELVAKRASEKGITSVTFDRG--GYLYHGRVKALAEAARENGLEF--------------------------------------------------------- |
| 1JJ2 Chain:M ((1-186)) | ATGPRYKVPMRRRREARTDYHQRLRLLKSG---KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1206 for 874 contacts (1.4/contact) +
2D Compatibility (PS) -13084 + (NN) -7013 + (LL) 128
1D Compatibility (HY) 800 + (ID) 1550
Total energy: -19513.0 ( -22.33 by residue)
QMean score : 0.409
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