Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIKKYKPTTNGRRHMTSSDFAEITTSTPEKSLLRPLKKKAGRNNQGKLTVRHHGGGHKRQYRVIDFKR---NKDGIPGRVATIEYDPNRSANIALINYADGEKRYIIAAKGLEVGQT-IY-SGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGTSAQVLGKEGKYVLIRLNSGEVRM-ILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPIGRKSPMSPWGKPTLGYKTRKKNNNSDKFIVRRRKKK |
1RL2 Chain:A ((60-195)) | ------------------------------------------------------------QYRIIDFKRDKD---GIPGRVATIEYDPNRSANIALINYADGEKRYIIAPKNLKVG--MEIMSGPDADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGEV-RMILGKCRATVGEVG--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35778 for 950 contacts (-37.7/contact) +
2D Compatibility (PS) -13058 + (NN) 727 + (LL) 4524
1D Compatibility (HY) -5600 + (ID) 2700
Total energy: -51885.0 ( -54.62 by residue)
QMean score : 0.229
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