Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLTIGCDHGGRRLKDAIVKHLREKDIEVVDIGTYTDESVDFPSYAEEVANQVVSGQSELGILCCGTGIGMSIAANKVDGIRAAVVSDTFSARATREHNNSNILCLGERVIGEGLALLLVDTWLEASFAGDRHKRRLDKITELERK
3PH3 Chain:B ((21-166))
MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQGGRHATRVGKIGEIEKK
General information:
TITO was launched using:
RESULT:
Template:
3PH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114720 for 1231 contacts (-93.2/contact) +
2D Compatibility (PS) -16166 + (NN) -10054 + (LL) 0
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -158990.0 ( -129.16 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_3PH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PH3-query.scw
PDB file :
Tito_Scwrl_3PH3.pdb
: