Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSKRLVLIVEDEDGISNFISAVLTASDYSVIKAVNGKEALEQTASHSPDVVLLDLGLPDMEGLDVLRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQPSSKESPNDHIIRIQDLYIDDDRRLVKMDDTEIHFTPIEYKILLLLARHAGKVLTHDFIIREIWGPYPSENQALRVNMSNIRRKIEKNPAEPAYILTEVGVGYRMAEE
1ZH4 Chain:B ((4-118))
------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR--------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76859 for 904 contacts (-85.0/contact) +
2D Compatibility (PS) -13070 + (NN) -9196 + (LL) 8460
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -105565.0 ( -116.78 by residue)
QMean score : 0.694
(partial model without unconserved sides chains):
PDB file :
Tito_1ZH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZH4-query.scw
PDB file :
Tito_Scwrl_1ZH4.pdb
: