Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNIKEIAKLAGVSVTTVSRVLNNHPYVAEEKRVRVQAVIDELDYSPNRSAMDLARGKTNTVGVIIPYNDHPWFDKIVNGILEVAFKNRYSVTLFPTGYDPKEEEKYLMRLKTKQVDGLIITSRANNWDVILPYLAYGP---IIACEYVESKEVSCSYIDRVKAYRAGFQFLEDEGYKKVAFTAGRASRESTSTYGKINAYEQVFGPVG---DNRFLSEC-YTLEDGLKAGEHFFAAGKDWPDAIYANGDEVAAGVMYHVKKLGLRVPEDVAILGQENLPIGKVLEITTLDHNLKKLGENAFTIFEQGKLQRIKVEHELIRRKTV |
| 3OQM Chain:C ((5-276)) | ---IYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMG-GNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKGHTDIAFVSGPMA-EPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK-PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDN----------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123469 for 2034 contacts (-60.7/contact) +
2D Compatibility (PS) -29412 + (NN) -17789 + (LL) 4428
1D Compatibility (HY) -13200 + (ID) 4300
Total energy: -183742.0 ( -90.34 by residue)
QMean score : 0.503
|
|
|