Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRNLTKKMDDNLVLKDVSFDLKAGEITALIGRNGVGKTTLFSTMTGIYLPDEGD--VFLDEESIFK-HPEVKQQLFFLEDNMNHFNTYSV----QTVVKIYRQIYTTFDEAFFNELMQQFELPMKAKLM--SFSKGRKALFFIILAFSLNVRFLLLDEPLDGLD---IIIKKQILATIKDTVKKRGTSVVIASHRLEELEAIADRV-IVLKGASVELDYYLEDMRTDAVKIQVAFKTKKIPGFVKNNAQLLYRNGRIYTLLVTENASSFLAELRLEEPVLLEEMSISIEDIFTVHLANDKIDYYEI |
| 4P32 Chain:B ((3-212)) | LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDS----GLGVLITDHNVRETLAVCERAYIVSQG---------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4P32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -136832 for 1489 contacts (-91.9/contact) +
2D Compatibility (PS) -20644 + (NN) -995 + (LL) 8760
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -164261.0 ( -110.32 by residue)
QMean score : 0.393
|
|
|