Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VERVYNFSAGPAVLPVPVLEKVQRELLSYNGSGMSVMELSHRSELFQNILDDAESLIRELMEIPDNYKVLFLQGGASLQFDMVPMNLANGKKAA-YVNTGSWAKKAISEAKKIQGVEVEVIASSEDRNFSYIPEIPT--VSSDVAYLHVTTNNTIEGTAMFDVPDSAVPVV-ADMSSNILSSVYDVKKFGLIYAGAQKNIGPAGLTLVIVREDLIGQVE-GLPSMLDFKVQAENDSMYNTPPTFAIYVAKLVFEWIKEQGGVAGIEALNRKKAALLYDYIDQSDFFSSPVEPSARSLTNVPFVTNSAEFDKAFVKEAEANGFENLKGHRSVGGMRASLYNAFPIEGVEALIAFMEKFANARKGGEVRV |
| 3QBO Chain:B ((6-359)) | --QVYNFSAGPAMLPVEVLRRAQQELRDWHGLGTSVMEVSHRSKEFMQVAEESEKDLRDLLNVPANYKVLFCHGGARAQFAAVPLNLLGDRNSADYVDGGYWAHSAIKEAQKYCTPNV-IDVTTHDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGIAIDEQPDFGNKVVVADFSSSILSRPIDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHTALPSILDYKILADNDSMFNTPPTFAWYLSGLVFKWLKEQGGLGEMEKRNQAKAELLYGAIDRTGFYRNDVAITNRSWMNVPFQMADASLDKLFLSEAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADF----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QBO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188337 for 2957 contacts (-63.7/contact) +
2D Compatibility (PS) -38519 + (NN) -23762 + (LL) 1016
1D Compatibility (HY) -33600 + (ID) 9300
Total energy: -292502.0 ( -98.92 by residue)
QMean score : 0.520
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