Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLIETIEHFLAYSDDKLEELADKNYQLRQTIVEKEKIESREK
3GFK Chain:B ((271-288))
----INTVQELANKTEEDMMKV----------------------
General information:
TITO was launched using:
RESULT:
Template:
3GFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5471 for 72 contacts (-76.0/contact) +
2D Compatibility (PS) -1804 + (NN) -783 + (LL) 2216
1D Compatibility (HY) -1200 + (ID) 100
Total energy: -7142.0 ( -99.19 by residue)
QMean score : 0.788
(partial model without unconserved sides chains):
PDB file :
Tito_3GFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFK-query.scw
PDB file :
Tito_Scwrl_3GFK.pdb
: