Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVSQTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHASK--SKFNAVLQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDG-LDYEILTNIFEVQLLERFGVALNFHDCVFCHRVGL--PFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSIQFDDLQTISVKPEMKLKIRQFLDMIYDEYVG-IHLKSKKFIDDLSSWGSIMKSD |
| 3Q8D Chain:A ((2-232)) | --EGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFG-GRGEVKTLRSAEAVSLALPLS-G-ITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDNK----TFTGRQLKALNA---REFP-------DADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFM--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130547 for 1707 contacts (-76.5/contact) +
2D Compatibility (PS) -23718 + (NN) -2403 + (LL) 2048
1D Compatibility (HY) -5200 + (ID) 2100
Total energy: -161920.0 ( -94.86 by residue)
QMean score : 0.424
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