Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIAI---DAMGGDYAPKAIVEGVN----QAISDFSDIEVQLYGDQKKIEKYLTVTERVSIIHTEEKI---------NSDDEPAKAVRRKKQSSMVLGAKAVKDGVAQAFISA--------GNTGALLAAGLFVVGRIKGVD------RPGLMSTMPTLDGVGFDMLDLGANAENTASHLHQYAILGSFYAKNVRGIE-------VPRVGLLNNGTEETKGDSLHKEAYELLAAEPSINF-IGNIEARDLMSSVADVVVTDGFTGNAVLKTMEGTAMSIMGSLKSSIKSGGVKAKLGALLLK------------DSLYQLKDSMDYSSAGGAVLFGLKAPIVKCH--GSSDSKAVYSTLKQVRTMLETQVVDQLVDAFTDE---------------- |
| 1K5H Chain:A ((1-398)) | MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6129 for 2639 contacts (2.3/contact) +
2D Compatibility (PS) -34042 + (NN) 771 + (LL) 0
1D Compatibility (HY) 800 + (ID) 1900
Total energy: -28242.0 ( -10.70 by residue)
QMean score : 0.128
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