Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MASGEKAKIQRKKSGAWSMTYKTLDGNVVATFRPMF------KKTGSHC--YISTSKMTKSDGNNNFSIQIYYKGTSNVK--------IKMFDDNPEHTMQFSK---------KKFANN-MLNRDESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEG---RTTVFPAITKTGYWNGITSHGSYVIKNDDLPK---KIKNYYEIHVYGANSGAINSTGSLKRIFYL--------VPPKV-------------EGPDGKVLSKRQVFEVGANNQLISLSYQ-SPDWWKRYKKSGLE------------KDLDVDA--IYRGDFSSLKGTWRNGKGEVLTINDDGSTDDGERISIGSTEKSRLPSVGMSSGNFGVSVYLFQIGVSNPYIENGHTSDTTRPRLA--------------IGLNPGDFPTDAYYYRY-------------- |
| 4TWA Chain:A ((3-497)) | MAITSKKIENFSDWYTQVIVKSELIEYYDISGCYILRPAAYYIWECVQAFFNKEIKKL--NVENSYFPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDSNLPEEIAIRPTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLY--RRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENG--RAIQAATSHYLGTNFAKMFKIEFEDENEVKQYVHQTSWGCTTRSIGIMIMTHGDDKGLVLPPNVSKYKVVIVPIFYKTTDENAIHSYCKDIEKILKNAQINCVYDDRASYSPGYKFNHWELRGIPIRIEVGPKDLQNNSCVIVRRDNNE---KCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDSIVQVTSFSEVMNALNKKKMVLAPWCEDIATEEEIKKETQRLSLTLSGAMKPLCIPLDQPPMPPNMKCFWSGKPAKRWCLFGRSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 59209 for 2451 contacts (24.2/contact) +
2D Compatibility (PS) -36981 + (NN) 16 + (LL) 12
1D Compatibility (HY) -11600 + (ID) 3200
Total energy: 7456.0 ( 3.04 by residue)
QMean score : 0.044
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