Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNWNLDNFDNLHSSLAESAYNSRPNSFPELFETDSVTEVKFSQPSEDNKGQITQGGTNLPNDGIVYLQ--PDKSLKSIDENVKVRVPDVNGGYHSEHCVTNSYQKGY
3MJR Chain:D ((148-208))
------------------SVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFG-SLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLH
General information:
TITO was launched using:
RESULT:
Template:
3MJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4779 for 259 contacts (18.5/contact) +
2D Compatibility (PS) -6253 + (NN) -2727 + (LL) 812
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -7939.0 ( -30.65 by residue)
QMean score : 0.080
(partial model without unconserved sides chains):
PDB file :
Tito_3MJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MJR-query.scw
PDB file :
Tito_Scwrl_3MJR.pdb
: