Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSREYITLSKNIIKHLGGQNNINNVYHC-QTRLRFSLNDPTKVNLEQLKTLKEVKTVVISGGQHQIVIGTHVAKVFEEINSLIETNSTTKTEQTKKAKAVSRIIDFVSGT-FQPILPALSGAGMIKALLALLLVFKILTPLSQTYILLNLFADGVFYFLPILIAITAAQKLKANPILALGTVVMLLHPNWANLVASGKPVSL-FHTIPFTLTNYASSVIPIILII-CVQAYIEKYLNQIIPKSLRLVLVPMLIFLSMGILSFSILGPMGTIAGQYLAVIFTFLSKYASWAPAFLVGAFAPILIMFGVHSGIAALGITQLTKLGFDSIFGPGMLC-SNIAQATAGTVVTLITKEKKLKEIAGPAAITAYMGITEPILYGVNLPKR--YPLIASLIGGGLGGLYAGIMNAHRFAVGSSGLPGLFLYISHTSTHLFITMLIAVIITVSTTAILTFILAQYYEKQVSIRQRD |
| 4PE6 Chain:A ((18-339)) | --KPFIALSNGFIG--------NGWRQTMIAKFEEAAKQAQA------DGLIGKYKVVNAPGNNS------ATEQVAQIKSLLLQKPD------------ALLINPASPTALQPVIQQACDAGV------KVVVFDSAIDAPCAYILQNSFVDWATYAAKPVLESIGGK----------GNVIVVRG------VVGSQPEAEMYETTKKILAEYPQVKTVATVTGMCDGATAQKAVLGVLPSVST---VDAVI---------------GCGDGYGVAQAFATAGK-------------PIPAVTFETN--GRALSYWKDNKIDNGSVA-----VMSDPAQSVAALWAALDLLE------------------------GRDLPKQMTFPIV--LIEEKDRDTWASVLKPDEYA-------------AWPWTRELFRQQVEAIKTGGEP------------VQPPIPST- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188358 for 2670 contacts (-70.5/contact) +
2D Compatibility (PS) -31318 + (NN) 13470 + (LL) 11148
1D Compatibility (HY) 11600 + (ID) 1350
Total energy: -184808.0 ( -69.22 by residue)
QMean score : 0.165
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