Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVESEAV
2PK0 Chain:C ((6-246))
MEISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVE----
General information:
TITO was launched using:
RESULT:
Template:
2PK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118465 for 2073 contacts (-57.1/contact) +
2D Compatibility (PS) -26032 + (NN) -8527 + (LL) 412
1D Compatibility (HY) -32000 + (ID) 12000
Total energy: -196612.0 ( -94.84 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_2PK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PK0-query.scw
PDB file :
Tito_Scwrl_2PK0.pdb
: