Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKYSIRGENIEVTEAIREYVETKLSKVEKYFNEAQELDTRVNLKVYREKTAKVEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYREKIPASQVFTTEFEAEPDEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLYKREDGELGLIEAKGN
3TQM Chain:A ((1-91))
-MHIQMTGQGVDISPALRELTEKKLHRIQPCRDEISNIHIIFHINKL---KKIVDANVKLPGSTINAQAESDDMYKTVDLLMHKLETQLSKYKAK-----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40449 for 638 contacts (-63.4/contact) +
2D Compatibility (PS) -9700 + (NN) -1260 + (LL) 7180
1D Compatibility (HY) -7600 + (ID) 1150
Total energy: -52979.0 ( -83.04 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_3TQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQM-query.scw
PDB file :
Tito_Scwrl_3TQM.pdb
: