Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFYTQNEEELIALGQKLGTVL-----KSGDIVLLTGNLGAGKTTLTKGIAKGLDIKQMIKSPTYTIVREYE--GRVPLYHLDVYRIGDDPDSID---LDDFLFGQGVTVIEWGELLSDNLINNYLEIVITRSNQGRQVQLEAYGHRAREIIEAIQDV
1HTW Chain:B ((7-158))
--YIPDEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKM-IYHFDLYRLA-DPEELEFMGIRDYFNTDSICLIEWSEKGQGILPEADILVNIDYYDDARNIELIAQTNLGKNIISAFSN-
General information:
TITO was launched using:
RESULT:
Template:
1HTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87656 for 1078 contacts (-81.3/contact) +
2D Compatibility (PS) -15289 + (NN) -4142 + (LL) 316
1D Compatibility (HY) -14000 + (ID) 2450
Total energy: -123221.0 ( -114.31 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_1HTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HTW-query.scw
PDB file :
Tito_Scwrl_1HTW.pdb
: