Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKTKKIPLRKSVVSGEVIDKRDLLRIVKNKE----GQVFIDPTGKQNGRGAYIKLDNDEAILAKKKRVFDRSFSMEVSDEFYDELLAYVDHKVKRRELGLE
1GH9 Chain:A ((19-67))
------AKTRKC-VCGRTVNVKDRRIFGRADDFEEASELVRKLQEEKYGSCHFTNPSKRE------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1GH9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7460 for 159 contacts (46.9/contact) +
2D Compatibility (PS) -4472 + (NN) -376 + (LL) 4172
1D Compatibility (HY) 1200 + (ID) 300
Total energy: 7684.0 ( 48.33 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_1GH9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GH9-query.scw
PDB file :
Tito_Scwrl_1GH9.pdb
: