Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKRIKPNKKRELLKAKGINWKDVRLSQTLQEVASPKKKAPEAPKAVDLLEGLTANKQDVLKEAGLVSLEAFAKVSEADVLALKGIGPAAIKQLVDNGVVFAK
2P6R Chain:A ((625-679))
-------------------------------------HGVKEELLELVRIRHIGRVRARKLYNAGIRNAEDIVRHR-EKVASL--IGRGIAERVVEGISVKS-
General information:
TITO was launched using:
RESULT:
Template:
2P6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30965 for 388 contacts (-79.8/contact) +
2D Compatibility (PS) -5818 + (NN) -2695 + (LL) 2780
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -38798.0 ( -99.99 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_2P6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P6R-query.scw
PDB file :
Tito_Scwrl_2P6R.pdb
: