Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------MSDVVEKQTAKSFIMNVL---NGLALGTVIVLIPGAILGELMKALLPMWSGFATLI-------------------------AATAVATSMMGLVIGIMVGLNFKFNPIQSASLGLAVMFAGGAATFLKGAIMLKGTGDIINMGITAALGVLLIQFLS-----DKTKSFTLIVIPTVTLLLVGGVGHVLLPYVKMITTMIGQ-----GIASLLGLQPVLMSIL---------IAMIFCFLIVSPITTVGIALAISLSGIGSGAANLGI----------------------CAASFGLCMAGWSVNSKGTALAHVLGSP---------KISMANVLAKPKIMLPMISSAAILGILGALFNIQGTPASA---GFGISGLIGPI--NALNLAKGGWSVMNMLLIIIIFVAAPIILNF---IFNYLFIKVLKIIDPMDYKLDI |
3OC2 Chain:A ((35-545)) | ARSVRHIAIPAHRGLITDRNGEPLAVSTPVTTLWANPKELMTAKERWPQLAAALGQDTKLFADRIEQNAEREFIYLVRGLTPEQGEGVIALKVPGVYSIEEFRRFYPAGEVVAHAVGFTDVDDRGREGIELAFDEWLAGVPGKRQVLKDRRGRVIKDVQVTKNA-KPGKTLALSIDLRLQYLAHRELRNALLENGAKAGSLVIMDVKTGEILAMTNQPTYNPNNRRNLQPAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYPGTLQIGRYTIRDVSRNSRQLDLTGILIKSSNVGISKIAFDIGAESIYSVMQQVGLGQDTGLGFPGERVGNLPNHRKWPKAETATLAYGYGLSVTAIQLAHAYAALANDGKSVPLSMTRVDRVPDGVQVISPEVASTVQGMLQQVVEAQGGVFRAQVPGYHAAGKSGTARKAYRSLFAGFAPATDPRIAMVVVIDEPFGGLVSAPVFSKVMAGALRLMNVPPDNL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -394544 for 2722 contacts (-144.9/contact) +
2D Compatibility (PS) -34803 + (NN) 9441 + (LL) 260
1D Compatibility (HY) -800 + (ID) 2700
Total energy: -423146.0 ( -155.45 by residue)
QMean score : 0.206
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