Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MAKTALNIP-FTVEGIENYYQNI-----KMILSLADKWSIPKDDLLLFLKGLKAIDDIKVGSPIFK-YFWTSLSLQAPLKALEFVLEQAKMPTELSGELSETQYLVAQFSDELAPHDDFWIALSQV--------IYDSFPGNSLAEDTVL--NRKLHQFRYLISSQQAQYVRRYFKDVGMTDRDALVNYLSCLREPDNIAYYESARLHNKRRRNGEIFAF---PDDEPVINSKLLISFHTEFIIDDKGNFLNEIDAEVITSNGIINGASFNYAFKNNTRHKELDVDPVKLDPKFRN----DMTRGYRSPNLSR----RKW-FFFKEEDYDCSYFNK--KGYYAFGRR---SAKQSVDKQVKYLKKAVQKMRLN |
| 3ES5 Chain:A ((42-420)) | MRLGWIDPLPQVDTIFPLGLEPNVESIPAGEVELDFNLPETIAKPFADTVTSVGDRIQLVDDDKENIATSIYGLSFFKAARQLYSTMLDHEKAVNQPLKAVYY--DETPIPAHMSGALGIIGHMKTKVGDVLVKDAGVLFKRGTAAGVTKFSEIDNDKTWNLDCSKLVWADHSSLSMIKRLASEKISQLVKQRYRVTDAQGHVYSVS-MPQLTDQALPDYYDSIPDVAPNSDQLRVLTAALQMSLAQFRNDELP---HDE----DRSDLLTTLD--LLYADGAYEISALRDQFELLMARYTTDF-KWRVESIFKVGPPPAGTTGYGAQTVSSTGNTARWQFPLSDADINIGYLFSPSKSFSLFPKMVGYSKRAREDASASFANSDAKKFYAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ES5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10711 for 2259 contacts (-4.7/contact) +
2D Compatibility (PS) -32779 + (NN) 1848 + (LL) 1404
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -55138.0 ( -24.41 by residue)
QMean score : 0.190
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