Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVITVKNDIEGGKIAFTLLEEKMKAGAQTLGLATGSSPITFYEEIVKSNLDFSNMVSINLDEYVGIAASNDQSYSYFMHKHLFDAKPFKENNLPNGLAKDLKEEIKRYDAVINANPIDFQILGIGRNGHIGFNEPGTPFDITTHVVDLAPSTIEANSRFFNSIDDVPKQALSMGIGSIMKSKTIVLVAYGIEKAEAIASMIKGPITEDMPASILQKHDDVVIIVDEAAASKL
2RI1 Chain:B ((3-233))
MKTIKVKNKTEGSKVAFRMLEEEITFGAKTLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAKPFKKSYLPNGLAADLAKETEYYDQILAQYPIDLQILGIGRNAHIGFNEPGTAFSSQTHLVDLTPSTIAANSRFFEKAEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI
General information:
TITO was launched using:
RESULT:
Template:
2RI1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133535 for 1955 contacts (-68.3/contact) +
2D Compatibility (PS) -25252 + (NN) -15652 + (LL) 0
1D Compatibility (HY) -26400 + (ID) 7300
Total energy: -208139.0 ( -106.46 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_2RI1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RI1-query.scw
PDB file :
Tito_Scwrl_2RI1.pdb
: