Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRSKLAAGFLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVKTSKAAQQSMLTLILSRVFDTQYGDKVSDKKVSEAYNKTAKGYGNSFSSALSQAGLTPEGYKQQIRTTMLVEYAVKEAAKKELTEANYKEAYKNYT-----PETSVQVIKLDAED-------------------------KAKSVLKDVKADGADFAKIAKEKTTATD--KKVEY-KFDSAGTSLPKEVMSAAFKLDKNGVSDVVSTVDSTTYKTSYYIIKVTDKTEKKSDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVKIKDKAFAGILSQYATTSGSSSLKK |
| 1J6Y Chain:A ((1-120)) | --------------------------------------------------------------------------------------------------------------------------------------------------HMASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGR--GQMQKPFEEATYALKVGDISDIVDTDS------GVHIIKRTA-------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1J6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26125 for 609 contacts (-42.9/contact) +
2D Compatibility (PS) -9809 + (NN) -7829 + (LL) 14716
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -33997.0 ( -55.82 by residue)
QMean score : 0.467
|
|
|