Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNIELKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSEGYKDFSEIAIYGNTEEPISPCGACRQVMVEFFNKNAKVTLIAKNGKTVETTVGELLPYSFVDLK
1JTK Chain:B ((1-125))
MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAERTALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSED
General information:
TITO was launched using:
RESULT:
Template:
1JTK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54402 for 1014 contacts (-53.7/contact) +
2D Compatibility (PS) -13752 + (NN) -5848 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3350
Total energy: -86952.0 ( -85.75 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1JTK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JTK-query.scw
PDB file :
Tito_Scwrl_1JTK.pdb
: