Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKQKLLLLIGGLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNKIQKYLLLVSDSGDALDLEYFYSIQD----LKKNKDLGKFETRKSQIEKPGGYNELENKEVPFEYFKNNIVYPKGKPNITFDDFIIGAMDTKELKKLKVKSYLLKHPETELKDITYELPTQSKLIKK |
2KVZ Chain:A ((1-85)) | ----------------------------------------------------MDFGKPNQVTVNYLDENNTSIAPSLYLSGLFNEAYNVPMKKIKGYTLLKYDSEILGVFTE-SPQTINIIYQKKAPEQALEHHHHHH---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21216 for 437 contacts (48.5/contact) +
2D Compatibility (PS) -8218 + (NN) 1419 + (LL) 8832
1D Compatibility (HY) 0 + (ID) 450
Total energy: 22799.0 ( 52.17 by residue)
QMean score : 0.079
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