Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKFLKRLIALIIIIFIGYRLVIIHENVKKVLQYHDLVQNTLAENGSEANVHLVLSMIYTETKGDA--------IDVMQSSESISG------------TTNSITDSHTSIKHGVTLLSQNISQAKKAKVDVWTAVQAYNFGSSYIDYVADHGGENSIELAKNYSKNVVAPSLGNYNGDTYFYYHPLALISGGKLYKNGGNIYYSREVQFNLYLIKIMELF |
1QSA Chain:A ((451-564)) | -------------------------------LAYNDLFKRYTSGKEIPQ--SYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFG---NNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37224 for 715 contacts (-52.1/contact) +
2D Compatibility (PS) -9403 + (NN) 1468 + (LL) 4844
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -43165.0 ( -60.37 by residue)
QMean score : 0.336
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