Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTITQNRVKELRKQAGLSQQALADQIGVMRKTISHWELGNHRISTDNAKKLSQFFQVSIDDLLE
3JXD Chain:R ((2-65))
-TQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLK
General information:
TITO was launched using:
RESULT:
Template:
3JXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21583 for 435 contacts (-49.6/contact) +
2D Compatibility (PS) -6824 + (NN) -502 + (LL) 208
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -32551.0 ( -74.83 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_3JXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JXD-query.scw
PDB file :
Tito_Scwrl_3JXD.pdb
: