Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNREEVQLLGFEIVAYAGDARSKLLEALRAAEAGDFSKADALVEEASGCIAEAHKSQTTMLAKEAAGEEIPYSVTMMHGQDHLMTTILLKDVMHHLIELYKRGIK
2V6Y Chain:A ((10-47))
------------------MARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRISYLEKVL---------------------
General information:
TITO was launched using:
RESULT:
Template:
2V6Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2318 for 216 contacts (10.7/contact) +
2D Compatibility (PS) -4586 + (NN) -5012 + (LL) 3800
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -6230.0 ( -28.84 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_2V6Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V6Y-query.scw
PDB file :
Tito_Scwrl_2V6Y.pdb
: