Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAIIAKKAEQVELIAEKMKAAASIVVVDSRGLTVEQDTNLRRSLRES---DVEFKVIKNSILIRAAEKAGLEDLKELFVGPSAVAFSN-EDVIAPAKVISDFAKDA--EALEIKGGSVDGKFTSVEEINALAKLPNKEGMLSMLLSVLQAPVRNVAYAVKAVAEKDEEVA |
| 1ZAV Chain:A ((0-162)) | -VMLTRQQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREKYGDGARFRVVKNTLLNLALKNAEYEGYEEFLKGPTAVLYVTEGDPVEAVKIIYNFYKDKKADLSRLKGGFLEGKKFTAEEVENIAKLPSKEELYAMLVGRVKAPITGLVFALSGILRNLVYVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29568 for 1066 contacts (27.7/contact) +
2D Compatibility (PS) -16657 + (NN) -3406 + (LL) 208
1D Compatibility (HY) 5600 + (ID) 850
Total energy: 14463.0 ( 13.57 by residue)
QMean score : 0.282
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