Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHP-RPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKEIGIEIANHIVVFGGKEITVPDKLTVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGV-------IETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
| 1UM0 Chain:C ((8-357)) | LRLTTFGESHGDVIGGVLDGMPSGIKIDYALLENEMKRRQGGRNVFITPRKEDDKVEITSGVFEDFSTGTPIGFLIHNQ--------------RARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGG-GRSSARESAIRVAAGAFAKMLLREIGIVCESGIIEIGG--IKAKNYDFNHALK-----SEIFALDEEQEEAQKTAIQNAIKNHDSIGGVALIRARSIKT-NQKLPIGLGQGLYA--KLDAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYND---LMDQKGFL--SNRSGGVLGGMSNGEEIIVRVHFKPTPSIFQPQRTIDINGNECECLLKGRHDPCIAIRGSVVCESLLALVLADMVLLNLTSKIEYLKTIYNEN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99569 for 2673 contacts (-37.2/contact) +
2D Compatibility (PS) -36878 + (NN) -13870 + (LL) 3464
1D Compatibility (HY) -18400 + (ID) 6750
Total energy: -172003.0 ( -64.35 by residue)
QMean score : 0.399
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