Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSINIAIDGPASSGKSTVAKIIAKNLNYTYLDTGAMYRCATYLALQHGYEAQDVSKILGLLAERPISFGKAEDGSQTVFIGTEEVTLAIRQNDVTNNVSWVSAIPEIREELVNQQRRIAKDGAIIMDGRDIGTVVLPDAELKIFLVASVDERAERRFKENQEKGIESDFETLKSEIAARDYKDSHREVSPLKAAEDAIEFDTTGVSIEGVVTFIQEKAEKIIDMKN
2H92 Chain:B ((3-207))
--AINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYRALTYKYLKLN-KTEDFAK---LVDQTTLDLTYKADKGQCVILDNEDVTDFLRNNDVTQHVSYVASKEPVRSFAVKKQKELAAEKGIVMDGRDIGTVVLPDADLKVYMIASVEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKSIEEVTDEILAMVSQI-----
General information:
TITO was launched using:
RESULT:
Template:
2H92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70153 for 1634 contacts (-42.9/contact) +
2D Compatibility (PS) -22107 + (NN) -8813 + (LL) 1128
1D Compatibility (HY) -18400 + (ID) 5300
Total energy: -123645.0 ( -75.67 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2H92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H92-query.scw
PDB file :
Tito_Scwrl_2H92.pdb
: