Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYL-YNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVT-KSDQPKEKITITSIKVIKDYKFK |
2OJU Chain:B ((9-160)) | -----------------------------------------------------------------------------VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKK---------FEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQ------------------------PHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56236 for 1141 contacts (-49.3/contact) +
2D Compatibility (PS) -16181 + (NN) -8013 + (LL) 6736
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -92644.0 ( -81.20 by residue)
QMean score : 0.555
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