Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTSKQRAFLKSEAHSMKPIIQIGKNGLN-DQIKTSVRNALDARELIKVTLLQN------TDEDIHDVAEVLEDEIGCDTVLKIGRILILYKESARKENRKISVKVKAVKSN-----
2EE3 Chain:A ((1-108))
---------GSSGSSGLAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAPSPSSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
2EE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1895 for 600 contacts (-3.2/contact) +
2D Compatibility (PS) -9820 + (NN) 6385 + (LL) 968
1D Compatibility (HY) -800 + (ID) 600
Total energy: -5762.0 ( -9.60 by residue)
QMean score : 0.238
(partial model without unconserved sides chains):
PDB file :
Tito_2EE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EE3-query.scw
PDB file :
Tito_Scwrl_2EE3.pdb
: