Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRLSWEDYFMANAELISKRSTCDRAFVGAVLVKNNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGISTNNTEIYVTHFPCINCTKALLQAGVKKITYKANYRPHPFAIELMEAKGVAYVQHDVPEVTLGMEE
2HVW Chain:B ((38-182))
--RLSWQDYFMANAELISKRSTCNRAYVGAVLVKNNRIIATGYNGGVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITYNTAYRIHPFAIELMTQKEVEYVQHDVPRVKLGE--
General information:
TITO was launched using:
RESULT:
Template:
2HVW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95454 for 1147 contacts (-83.2/contact) +
2D Compatibility (PS) -15993 + (NN) -8594 + (LL) 440
1D Compatibility (HY) -20000 + (ID) 6300
Total energy: -145901.0 ( -127.20 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2HVW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HVW-query.scw
PDB file :
Tito_Scwrl_2HVW.pdb
: