Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METKINNSQKNRYKFVFGDKPLTLTTDKDNLFMEEIERVATEKYEAIKEKL--PNADNETIAILMAINALSVQLSREIDIEKMEDELNKLRSKTISDIKEKVSED
3HNW Chain:A ((9-98))
-----------TAEVILGGKVIKLGGYESEEYLQRVASYINNKITEFNKEESYRRMSAELRTDMMYLNIADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQ
General information:
TITO was launched using:
RESULT:
Template:
3HNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1701 for 422 contacts (4.0/contact) +
2D Compatibility (PS) -10130 + (NN) -9476 + (LL) 548
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -20557.0 ( -48.71 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_3HNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HNW-query.scw
PDB file :
Tito_Scwrl_3HNW.pdb
: