Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVMDSLIIKQLIKSTFDIPLQVTYPNGNIETYNGNNPHVKLKLNKNFSVSELSKDPSIVLGEAVMDGDIEIDGSIQELILSAYRCGDSFLRNSKFSKLIPKQFHDKKHSKSDIQKHYDIGNDFYKLWLDDTMTYSCAYFKHENDSLEQAQLNKVHHILNKLNAQPGGKLLDIGCGWGTLIITAAKEYGLNATGITLSEEQASFITKRIK-EEGLENKVTVLIKDYRDIHETYDYITSVGMFEHVGKENLSQYFQTISKRLNINGLALIHGITG-QVGDNHGSGTN---------SWINKYIFPGGYIPRLTENLNHIASAGLQIADLEPLRRHYQKTLELWTKNFHNALPEVQKTHDKRFINMWDLYLQSCAASFESGNIDIFQYLLSKGVSKDTMPMTRDYMYSAN |
| 1KPH Chain:C ((10-287)) | --------------------------------------------------------------------------------------------------------------ANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSK-RVLLAGWEQFDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSLQPHYAKTLDLWSAALQANKGQAIALQSEEVYERYMKYLTGCAEMFRIGYIDVNQFTCQK------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119829 for 2214 contacts (-54.1/contact) +
2D Compatibility (PS) -28363 + (NN) -9410 + (LL) 7180
1D Compatibility (HY) -22400 + (ID) 4750
Total energy: -177572.0 ( -80.20 by residue)
QMean score : 0.535
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