Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIIIVAHGNFPDGILSSLELIAGHQEYVVGINFIAGMSSNDVRVALQREVID---FKEILVLTDLLGGTPFNVSSALSVEYTDKKIKVLSGLNLSMLMEAVLSRTMFEHVDDLVDKVITSSHEGIVDFSTCLATQTAEATFEGGI
3MTQ Chain:A ((2-133))
KRHYIFASHGSFANGLLNSVELILGKQPDIHTLCAYVEEE-VDLTQQVEALVARFPAQDELIVITDIFAGSVNNEFVRFLS---RPHFHLLSGLNLPLIIDLLISAAE-DNTEKLITEALTNAKESIQYCNQTIASAM---------
General information:
TITO was launched using:
RESULT:
Template:
3MTQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89183 for 897 contacts (-99.4/contact) +
2D Compatibility (PS) -13980 + (NN) -1853 + (LL) 740
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -113876.0 ( -126.95 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_3MTQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MTQ-query.scw
PDB file :
Tito_Scwrl_3MTQ.pdb
: