Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKIFRTTLSASLGIVLVTILMIMGFLYNYFNHIQREQLRTQTALASQGISFEGKDYFENLKTSNVRITWVDNKGQVLYDTQSDAKHMKNHANRQEIKEAIKSGYGESTRWSATLTEKSIYAAQRLNNGTIVRLSVAQQTIFYLLLGMISPLAIIILLAIILSVLIARYIAKKVSEPLNNIDLDHPLSNDSYEEITPLLRRLDSHQAKIQHQKLLLQKRQKEFDTIISKIKEGMILLDDQARIVSINAEALKLFQINDDWHGRFMMEVSRDLTLKDLIDQGLKGKKKEANIGIENNHYRVLVRPTTDNNRVTGLVVLLFDVTDQLQMEQLQREFTANVSHELKTPLHVISGYSELLANQMVPNEEVPQFAAKIHKESERLVKLVEDIISLSHLDEQEKLPQETVNLYDLTQKVLEGLQAKADK--KHIQINFNGEEAILRGNPVLLNSLVYNLCDNAITYNHEKGQVNVTLKNSPDTITLEVSDTGLGIAEKDKKRIFERFYRVDKSRSKIVGGTGLGLSIVKSALDFHNGSIKV-DSHLGQGTTMTVLLHKQ
4BIU Chain:F ((70-284))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKEL----ERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDK--DGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLY-


General information:
TITO was launched using:
RESULT:

Template: 4BIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29936 for 1440 contacts (-20.8/contact) +
2D Compatibility (PS) -22531 + (NN) -4687 + (LL) 26160
1D Compatibility (HY) -11200 + (ID) 3750
Total energy: -45944.0 ( -31.91 by residue)
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_4BIU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BIU-query.scw
PDB file : Tito_Scwrl_4BIU.pdb: