Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIITVGKLKEKYLKEGVAEYQKRLNRFSKIETIELADEKTPDKASISENQRILDIEGERILSKIGERDYVIGLAIEGKQLPSESFSHLIDQKMISGYSTITFVIGGSLGLSQKVKK-RADYLMSFGLLTLPH-QLMKLVLMEQIYRAFMIRQGTPYHK
3KY7 Chain:A ((79-152))
---------------------------------------------------------------------QARVILM-PQGEPFSH-QKAVELSK-----ADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGSDGLLEFP
General information:
TITO was launched using:
RESULT:
Template:
3KY7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54065 for 419 contacts (-129.0/contact) +
2D Compatibility (PS) -7689 + (NN) -3963 + (LL) 6144
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -63423.0 ( -151.37 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_3KY7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KY7-query.scw
PDB file :
Tito_Scwrl_3KY7.pdb
: