Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANPISIDTEMITLGQFLK-LADVIQSGGMAKWFLSEHEVLVNDEPDNRRGRKLYVGDVVEIEGFGSFQVVN
3JAM Chain:E ((40-95))
---------ESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTFPAGFMDVITLEAT-------
General information:
TITO was launched using:
RESULT:
Template:
3JAM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19370 for 338 contacts (-57.3/contact) +
2D Compatibility (PS) -5604 + (NN) -171 + (LL) 844
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -26501.0 ( -78.41 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_3JAM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JAM-query.scw
PDB file :
Tito_Scwrl_3JAM.pdb
: