Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRRQMSFNGKSDMGILYLVPTPIGNLEDMTFRAIDTLKSVDAIAAEDTRQTKKLCHVYEIETPLVSYHEHNKESSGHKIIEWLKSGKNIALVSDAGLPTISDPGAEIVKDFTDIGGYVVPLPGANAALTALIASGIVPQPF-FFYGFLNRQKKEKKKELEALKKRQETIIFYEAPHRLKETLSAMAEILGD-REIAVTRELTKKYEEFIRGTISEVIGWANEDQIRGEFCLVVEGSNNEEVDEEEQWWETLTAKEHVEHYISKGATSKEAIKKAAVDRNVPKREVYDAYHIKQ |
1VE2 Chain:A ((1-223)) | ------------MRGKVYLVGAGFGGPEHLTLKALRVLEVAEVVLHDR-LVHPGVLALAKGELVPV---KTPQEAITARLIALAREGRVVARL-KGGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHDPALP----LPRADTLVLLM------GLKERLLERFPPETPLALLARVGWPGEAVRLGRVEDLPGLG--EGLPSPALLVVGKVVG------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85990 for 1695 contacts (-50.7/contact) +
2D Compatibility (PS) -21836 + (NN) -5721 + (LL) 6684
1D Compatibility (HY) -7600 + (ID) 1900
Total energy: -116363.0 ( -68.65 by residue)
QMean score : 0.382
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